CDS

Accession Number TCMCG007C21621
gbkey CDS
Protein Id XP_009135426.1
Location complement(join(18192219..18193287,18193369..18194228,18194417..18194667,18194814..18196572,18196699..18196839,18197154..18198593))
Gene LOC103859609
GeneID 103859609
Organism Brassica rapa

Protein

Length 1839aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009137178.3
Definition uncharacterized protein LOC103859609 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category O
Description PHD-zinc-finger like domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000122        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010570        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019898        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031312        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031935        [VIEW IN EMBL-EBI]
GO:0031936        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0042393        [VIEW IN EMBL-EBI]
GO:0042406        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045815        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045927        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045944        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0060969        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070784        [VIEW IN EMBL-EBI]
GO:0070786        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090033        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]
GO:1900428        [VIEW IN EMBL-EBI]
GO:1900430        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1905268        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000217        [VIEW IN EMBL-EBI]
GO:2000219        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]
GO:2001251        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGATCCTCGGGCTCTCCTTCTGGGAGGAAGAGTAAGAAGCTCGCCGCGATTTGCGAGGAGGAGTACAACAAAAACCACGGAGAGCCGAAGGACAGAGACGACGCCCCTCCTGCTGATTCCGAGCTTCGGCGGAGCTCTAGGGTTAGACGGATACCGTCAATCCTCGACGCTTCTCCTCCTCCCGCAAAGAAACGGCGCCGTTTGAATAGGAGTTCTAGGGGGAGTAGTAGCAGTAGAGTGGTGGTGGAGGAGGAGGAGAATGATGATTCGGATAATTGGAAATCTAGGTTGAGGTCGAGGAGGAGGAAGGCTGGTTCTCAGGCGAGGAGTGTTGTTAAGAGGAAGAGAAAGCTTGTTTTCGGAAACGGTGATGGTAATGAGGTGAGAGATAAAGCTACTAATGGTGGGAAGCTGATGAAGGGTAAGAAGCGAGTGGGCGTTAAAGAGTCTGAGAGTTCGGAGGATGAGTCGGATAACAGTAATGCTGAAGAGGAGAGTGCTAGCGAGTCTGAGGAATCGGATCAGGCTGAAAGTGAAGCTGGAGAGGAGGATGAGAAGGTGAAGAAGGCTACCAAAAGATCAGTTGTTTTAGAGAGTGAGGATGAAGCTGAAGTTGATGGAGGGGAGGCTGAGAGTGAGGAGGAAGCAGAGAGTACTGAGAATGAGACTGAGGATAGTGAAAGTGAAGCACAAGGTAGTGCAGAGAAGGAAGGAAGTGAGGTTGAAGGTAATCTGGATGGAACGGCAGCTGATACTGATGTTCGAATGGAAGAAGTGGAGAATGAGAGTGGGGATCAAGTGGAAGGATTGGAGAATGAGATTGAGATGGAAGTTGAAGGAACTGAGAGTAAGGAGCTGGGTGCAATGGTCTCTGCAAGTGGAAACGGCACTGGTATGCCAGGGGATGATAGTGAGGTTGCTGATAATGGTAAGACCAAGCAAGGAGATACTTTAGATCCTGAACTACTACAGAAAGATGCCATCGAGGTTAATGAGAGTTTGAAGCAGACCGATGACATTGGAGAGCAAGATGCTTCCAGAACAACATCTACTGATAAGGCCAACGATAAAGTGGGTGAAAGTGTGGAAATGCTTGACGGGTTGCCTATTCAAAATGAAACTTGCAACAAAGTAGTTGACTCAGTTTGCACTTCATCAGATAGACTTGGTAAACCTCCCTTCAAGCAAGCCAGACGCTGTGGTTTATGCGGAGTTGGCACTGATGGCAAACTCCCGAAGAAGTTGATACAAGATAATGGTGAAAGTGACGTAGAGGCACATAGCGGTTCTTCTTCTTCAGGGGAGCCAAACTATGACATATTAGATGGTTTCGGAGATGAACCTGGGTGGCTTGGCCGTCTATTGGGCCCTATAAACGATCGTTATGGAATTTCTGGAACGTGGGTTCATCAGCACTGTGCCGTATGGAGTCCCGAGGTTTACTTTGCTGGTGTGGGACGCTTAAAGAATATAAGGGCGGCACTTTGCAGAGGGAGGTCATTAAAATGCACTCGCTGTGAAAGACCTGGGGCAACCATCGGTTGTCGTGTTGATAGATGTCCAAGAACCTATCATTTGCCTTGTGCGCGAGCTAATGGTTGCATCTTTGATCACCGTAAGTTTCTCATTGCTTGCACGGACCACAGACATCATTTCCAACCCCATGGTCGTCAGTGTCAAGTCAGGGTGAAGAAGATGAAAACCAAGAAGATGCGTTTGGAGATGAGGAAACACTCAAATGATGCCTGGCGTAAGGATGTGGAAGCGGAAGAAAAGTGGTTTGAGAAATGTGGAGACGATGAAGAATTTTTAAAACGTGAAAGCAAGAGACTTCAACGAGATCTATTAAGAGTGGCGCCTGAGTATATTGGAGGCTCTGAATCTGAGAACGGAAAAGCATTTGAGGGATGGGATTCTGTTGCTGGGCTTGAGGGTGTAACCCAATGTATGAAAGAGGTTGTTCTTTTACCTTTACTGTATCCAGAGTTCTTTGATAACCTTGGACTTACACCACCAAGAGGTATCCTCTTGCATGGACATCCTGGAACTGGAAAAACCCTTGTGGTTCGAGCACTGATTGGTTCCCTCGCTCGTGGTAATAGACGGATTGCCTACTTTGCCCGCAAAGGGGCAGACTGTCTGGGAAAATACGTTGGTGATGCTGAGCGCCAGTTAAGGCTCTTATTTCAGGTCGCTGAAAAATGCCAACCATCCATCATATTTTTTGATGAAATTGATGGTCTTGCTCCCAAGCGGTCAAGGCAGCAAGATCAAACACACAGCTCCGTTGTATCCACATTGCTCGCTTTACTAGACGGCCTAAAGTCGCGTGGCTCAGTGGTAGTCATAGGTGCAACAAACTACCCTGATGCTATTGACCCAGCATTAAGGAGGCCTGGGAGATTTGATAGGGAGATCTATTTTCCACTACCATCGCTCGATGATAGAGCTGCAATCATCTCACTCCATACTAGAAAGTGGCCTAAGCCGGTGTCTGGATACTTGCTCAAGTGGGTTGCTAAAGAAACTGCCGGTTTTGCTGGTGCGGATATACAAGCTCTCTGCACGCAAGCTGCCATGATTGCCTTGAATAGGAGCTTTCCTTTGCAAGAATCTTTGGCCGCTGCAGAGTTGGGAATCTCTAGGAGTAATCGTGTTGCTCTACCATCCTTCTCAGTTGAAGAAAGAGATTGGTTGGAAGCTTTATCCCGCTCCCCACCCCCATGCTCTCGTAGAGGAGCGGGAAAAGCAGCTAGCGATATATTTTCTTCTCAACTTCCTGTTTACTTGGTGCCCTCTTTGTTACCGTCATTGTGTTCTTTACTTGTTGCTTTTCATCTTGAAGAGCGCATCGTCCTCCCACCTCTACTTGCCAAAGCTGCGGTTGATTTCCAAAATGTGATCTGTTCTGCTTTGGGCGACAAGAAGATAACTGATGCTTGCTGGTGGTCTCATGTTGATAGCCTTCTCCAGGACGTAGATGTTGTAAAAGATATAGTTCAGAGACTTTCTTATGCTGGGATCCTGGATGGAGGGTGTGACTTAGTTAGATCTGTTTCAAGCACCCCTGGTGCTGGAGACTGTAATTCGGGTTCTGCACAGTTCATGGTACACCGAGTCCGCCGACATCCTGGGTTGGGGAATGCTTCTTCAGAATCAATGAACAACTCTGGGTTCCAACTGCTTATTGCTGGAGAACCTAGATCTGGTCAACGTCATCTTGCTTCTTGTATCTTGCATTGTTTTATTGGAAATGCGGAGATGCAGAAGATAGACACGGCGACAATTTCACAAGAAGGAAATGGGGATCTGGTGCTAGGCGTAACTCACTTATTAATGAAATGTTCTAGCAGGAAATCATGTGTGGTATTCATGCCAAGGATTGACTTGTGGGCTGTAGAGACAGAAACTCAACTGGATGAGGAGGTCGAGTGTGATGATGATTCTGTAAAAGAAAATTCTTCTCCCGTTAGTCCAGAAACAGTGGAGAAAATGGAGTTGCAGTATTCTTCTCGAGTTTCACATGCTTGGAACACATTTTTTGAGCAAGTAGAATCATTGCGAGTTTCCACAAAGATAATAATTCTGGCTACTTCTAGCATGCCCTACGAACTCCTGCCTCCTAAGATACAACAGTTCTTTAAGACCGACCTATCAAAGGAATATCAGCCAAGTATGTCTGAGGCTGTACCTCAATTCACTGTACAAGTTGGTGAAAATTCTGACCAGGACATGGCCATTGACCTGTCTGCTACTGAGTTGTCAAGGCGGGCAATCCAAGTGTTTCTTCACTTAGTGCATCAGGGAACCCATACACACTATGACTTACAGAAGGCATACAAAAGAGAGGATCCTGAGCAGGGTTGCAGAGATCCATCTTATGAGAATAATCCTGATCATGGTGCAGAGGAAGAAGTAGGTATCAAATCAAAACCTCCTGAGGATTGTTCTTTAAAAGTGCCACCGATACCTATCAGCATAAATGCGAAACCTAAATCAACCTTGGAGTTAGCTGTTTCTACATTTGGTTATCAAATTCTACGGTTTCCTCAGTTTGCTGAGCTTTGTTGGGTGACATCAAAGCTTAAGGTAGGGCCAAGCGCAGATGTTTCGGGTCCTTGGAGAGGATGGCCGTTTAATTCGTGTATCATTCGTCCTTGTAATCCATCAGAGCAGACTATTACTGCTTCCGGTTCCAACAATGTTAGAGGCAAAGATGTATCTGGCACTGCCAGGGGCCTCGTTGCTGTTGGATTATCAGCGTATAGAGGAACCTATACGTCACTGAGGGAAGTCTCTTTTGAAGTAAGGAAAGTTCTCGAGCTCTTAGTTGGGCGGATCAATCTGAAAATCGATGCTGGAAAGGACAGATGTCAATATATCAGAATTTTGTCCCAAGTTGCTTATCTGGAAGATCTGGTTAACAGTTGGGTATATGCAATGCGAAGTTTTGAATCGAATGCTCAAACAGAGTCGATGAATCCATTGTCGTGTTCTGTAGCTGATGCGACAGTGAGGGATGAGCCAACTGAGCAAGGAACATCTGATCGATCAAAAGGAGACCTGAAAGAAGATACACAAAACATGAATTGTCCAGACCCTATAGCATCTACGGATCTTACCGACAATCATCAGCCAGTTGTGGAGATTACAGACGGCTTAGTTTTGATCAAAGAGAATGGTGATGATACTTCGAATTCTGCAGTGTTGATTGAGGATTCAGGAGTAGTTTCCTTGCATCAGGCTGTTCTCCTTGATCTTAACTCTCCTGCAGCCGACCATGAACAGAATGAAACCCAAACAACAGCAACAGTCACTTGTTTGCAAGAAAAAGATAATTCCGAAAACAATCATGTTGGATCTGGGGATCCCAATTCTATCTCACAGGAAGATCTCAAGAAATCAGCTGACTCAAGTAATGGTGAAGCAGTTCATGGCTTAGAATCTGCTAACAGCATGCCTGAGCCAGTCAAACAAGTTGAAACACCTGCAACAACCACTCCTCTGGATGACCCTAGTTTAGTTTGTTTTTACCGTTGCTGCCCTCAGTGTGTCTCCATCCTCCAAGATTCAATGCGTAAATTAGTTACTCGCGAATTGAGACTTGGTAGCAGCCACATCACAACAGAGGGTATACATGATGCGGTTTCTTTATTATCAGTGGAGCTGATCGCTGCTGTTAGAAAGTTCATATCTGCCAGAGCTACGCAGGAAGTAGAGGTTGAAGAACGTGATGGAAGCTCAGAAAAGGAAGCGTGTCCTTGCAAAAGCTCACCTAGTAATTTTCTTGCCTCGGCTGAGTGTTGCAGCCATTCTGCTGAAGAGCAAGGGAGCTTAGATAAAGCAAACGCATCTCCAAGCGCTAAGAGTTGGCTTGAACCAGTATTCGTTTTCAGGGATGGAATATTGGTTCCTCTAAGTAGCAGCGAAGATGACTCCGCTTTGCATTGTAGATATGATAGTTTCTGCCTTGGTTCCCTCATAGAGTTGGTTGCAACTGAGATGAAGCCTTTTTGA
Protein:  
MRSSGSPSGRKSKKLAAICEEEYNKNHGEPKDRDDAPPADSELRRSSRVRRIPSILDASPPPAKKRRRLNRSSRGSSSSRVVVEEEENDDSDNWKSRLRSRRRKAGSQARSVVKRKRKLVFGNGDGNEVRDKATNGGKLMKGKKRVGVKESESSEDESDNSNAEEESASESEESDQAESEAGEEDEKVKKATKRSVVLESEDEAEVDGGEAESEEEAESTENETEDSESEAQGSAEKEGSEVEGNLDGTAADTDVRMEEVENESGDQVEGLENEIEMEVEGTESKELGAMVSASGNGTGMPGDDSEVADNGKTKQGDTLDPELLQKDAIEVNESLKQTDDIGEQDASRTTSTDKANDKVGESVEMLDGLPIQNETCNKVVDSVCTSSDRLGKPPFKQARRCGLCGVGTDGKLPKKLIQDNGESDVEAHSGSSSSGEPNYDILDGFGDEPGWLGRLLGPINDRYGISGTWVHQHCAVWSPEVYFAGVGRLKNIRAALCRGRSLKCTRCERPGATIGCRVDRCPRTYHLPCARANGCIFDHRKFLIACTDHRHHFQPHGRQCQVRVKKMKTKKMRLEMRKHSNDAWRKDVEAEEKWFEKCGDDEEFLKRESKRLQRDLLRVAPEYIGGSESENGKAFEGWDSVAGLEGVTQCMKEVVLLPLLYPEFFDNLGLTPPRGILLHGHPGTGKTLVVRALIGSLARGNRRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPKRSRQQDQTHSSVVSTLLALLDGLKSRGSVVVIGATNYPDAIDPALRRPGRFDREIYFPLPSLDDRAAIISLHTRKWPKPVSGYLLKWVAKETAGFAGADIQALCTQAAMIALNRSFPLQESLAAAELGISRSNRVALPSFSVEERDWLEALSRSPPPCSRRGAGKAASDIFSSQLPVYLVPSLLPSLCSLLVAFHLEERIVLPPLLAKAAVDFQNVICSALGDKKITDACWWSHVDSLLQDVDVVKDIVQRLSYAGILDGGCDLVRSVSSTPGAGDCNSGSAQFMVHRVRRHPGLGNASSESMNNSGFQLLIAGEPRSGQRHLASCILHCFIGNAEMQKIDTATISQEGNGDLVLGVTHLLMKCSSRKSCVVFMPRIDLWAVETETQLDEEVECDDDSVKENSSPVSPETVEKMELQYSSRVSHAWNTFFEQVESLRVSTKIIILATSSMPYELLPPKIQQFFKTDLSKEYQPSMSEAVPQFTVQVGENSDQDMAIDLSATELSRRAIQVFLHLVHQGTHTHYDLQKAYKREDPEQGCRDPSYENNPDHGAEEEVGIKSKPPEDCSLKVPPIPISINAKPKSTLELAVSTFGYQILRFPQFAELCWVTSKLKVGPSADVSGPWRGWPFNSCIIRPCNPSEQTITASGSNNVRGKDVSGTARGLVAVGLSAYRGTYTSLREVSFEVRKVLELLVGRINLKIDAGKDRCQYIRILSQVAYLEDLVNSWVYAMRSFESNAQTESMNPLSCSVADATVRDEPTEQGTSDRSKGDLKEDTQNMNCPDPIASTDLTDNHQPVVEITDGLVLIKENGDDTSNSAVLIEDSGVVSLHQAVLLDLNSPAADHEQNETQTTATVTCLQEKDNSENNHVGSGDPNSISQEDLKKSADSSNGEAVHGLESANSMPEPVKQVETPATTTPLDDPSLVCFYRCCPQCVSILQDSMRKLVTRELRLGSSHITTEGIHDAVSLLSVELIAAVRKFISARATQEVEVEERDGSSEKEACPCKSSPSNFLASAECCSHSAEEQGSLDKANASPSAKSWLEPVFVFRDGILVPLSSSEDDSALHCRYDSFCLGSLIELVATEMKPF